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Original research
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Peer reviewed
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Statistical process control
methods used to evaluate the serologic responses of pigs infected with three Salmonella serovars
Métodos
de control estadístico del proceso utilizado para evaluar las respuestas
serológicas de cerdos infectados con tres serovariedades de Salmonella
Méthodes
statistiques de contrôle du processus utilisées pour évaluer
les réponses sérologiques de cochons infectés avec
trois serovars de Salmonella
D. H. Baum, MS,
DVM, PhD; S. Ward, PhD; C. L. Baum, MS; N. Lee; D. D. Polson, DVM, MS, PhD;
D. L. Harris, DVM, PhD; B. Nielsen, DVM, PhD
DHB, DDP: Boehringer
Ingelheim Vetmedica Inc, Ames, Iowa. SW: Statistical Process Controls Inc,
Knoxville, Tennessee. CLB, NL, DLH: Department of Microbiology, Iowa State
University, Ames, Iowa. DLH: Department of Veterinary Diagnostics and Production
Animal Medicine, Iowa State University, Ames, Iowa. BN: Danish Bacon and
Meat Council, Axelborg, Copenhagen V, Denmark. Corresponding author: Dr
David H. Baum, Circle Four Farms, PO Box 100, Milford, UT 84751; E-mail: dbaum@c4farms.com.
Cite as: Baum
DH, Ward S, Baum CL, et al. Statistical process control methods used to
evaluate the serologic responses of pigs infected with three Salmonella serovars. J
Swine Health Prod. 2005;13(6):304-313.
Also
available as a PDF.
Summary
Objectives: To confirm that the mix-ELISA detects antibody against Salmonella serovars
Typhimurium, Infantis, and Choleraesuis; to demonstrate that statistical process
control (SPC) methods can be used to validate the mix-ELISA; and to demonstrate
how SPC can be used to assess the Salmonella serologic status of swine.
Methods: Three groups of pigs were inoculated with Salmonella Typhimurium, Salmonella Choleraesuis, or Salmonella Infantis
(one serovar per group). Serologic responses were measured with the mix-ELISA
and compared to responses of a group of uninfected pigs. Mix-ELISA results
were evaluated using SPC methods to calculate a positive-negative cutoff value
and to determine assay diagnostic sensitivity and specificity. The SPC results
were compared to results of receiver operator characteristic (ROC) curve analysis.
Results: Three cutoffs were determined from the SPC methods: group
average (optical density [OD]% > 7.239), group range (OD% range >= 12.61),
and individual (OD% >= 12). ROC curve analysis also showed optimized sensitivity
(0.845) and specificity (1.00) when the individual cutoff was OD% >= 12.5.
The OD% values were highest in pigs infected with Salmonella Typhimurium.
Implications: The mix-ELISA detects antibody in pigs infected with Salmonella serovars,
including Choleraesuis. Statistical process control methods can be used with
mix-ELISA results to determine diagnostic cutoff values for assessing Salmonella serologic
status. The degree of Salmonella exposure in swine can be assessed using
SPC methods.
| Resumen
Objetivos: Confirmar que la mix-ELISA detecta anticuerpos contra las
serovariedades de Salmonella Typhimurium, Infantis, y Choleraesuis;
para demostrar que el método estadístico de control del proceso
(SPC por sus siglas en inglés) puede utilizarse para validar la mix-ELISA;
y para demostrar cómo se puede utilizar el SPC para evaluar el estado
serológico de Salmonella de los cerdos.
Métodos: Se inocularon tres grupos de cerdos con Salmonella Typhimurium, Salmonella Choleraesuis ó Salmonella Infantis
(una serovariedad por grupo). Se midieron las respuestas serológicas
con la mix-ELISA y se compararon con las respuestas de un grupo de cerdos no
infectados. Los resultados de la mix-ELISA se evaluaron utilizando métodos
del SPC para calcular el punto de corte positivo-negativo y para determinar
la especificidad y la sensibilidad de la prueba. Los resultados del SPC se
compararon con los resultados del análisis de curva de las características
del operador receptor (ROC por sus siglas en inglés).
Resultados: Se determinaron tres puntos de corte a partir de los métodos
SPC: promedio del grupo (densidad óptica [OD% por sus siglas en inglés] > 7.239),
rango del grupo (OD% rango >= 12.61) e individual (OD% >= 12). El análisis
de curva ROC también mostró una optimización en la sensibilidad
(0.845) y especificación (1.00) cuando el punto de corte fue OD% >=
12.5. Los valores del OD% fueron los más altos en los cerdos infectados
con Salmonella Typhimurium.
Implicaciones: La mix-ELISA detecta anticuerpos en cerdos infectados
con serovariedades de Salmonella, incluyendo la Choleraesuis. El método
de control estadístico del proceso puede utilizarse en conjunto con
los resultados de la mix-ELISA para determinar los valores de corte para valorar
el estado serológico de la Salmonella. El grado de exposición
de la Salmonella en los cerdos puede valorarse utilizando el método
de SPC.
| Resumé
Objectifs: Confirmer que la mix-ELISA détecte des anticorps
contre le serovars de Salmonella Typhimurium, Infantis et Choleraesuis;
pour démontrer que le méthode statistique de contrôle du
processus (SPC par ses sigles en anglais) peut être utilisée pour
valider la mix-ELISA; et pour démontrer comme le SPC peut être
utilisé pour
évaluer le statut sérologique de Salmonella du porcs.
Méthodes: Trois groupes de cochons ont
été inoculés avec la Salmonella Typhimurium, la Salmonella Choleraesuis,
ou la Salmonella Infantis (un serovar par groupe). Les réponses
sérologiques ont été mesurées avec la mix-ELISA
et ils ont été comparés aux réponses d'un groupe
de porcs qui n'étaient pas infectés. Les résultats de
la mix-ELISA ont été
évalués en utilisant des méthodes SPC pour calculer la
valeur limite (cutoff) positif-négative et pour déterminer la
spécificité et la sensibilité diagnostic de l'épreuve.
Les résultats du SPC ont été comparés aux résultats
de l'analyse de courbe de la caractéristique de l'opérateur receveur
(ROC par ses sigles en anglais).
Résultats: Trois limites a partir des méthodes SPC ont été déterminés:
moyenne du groupe (densité optique [OD% par ses sigles en anglais] > 7.239),
portée du groupe (OD% portée >= 12.61), et individuel (OD% >= 12).
Le analyse de courbe ROC a montré aussi la sensibilité optimisée
(0.845) et la spécificité (1.00) quand le limite individuel a été OD% >=
12.5. Les valeurs du OD% ont été les plus hautes dans les porcs
infectés avec Salmonella Typhimurium.
Implications: La mix-ELISA détecte des anticorps dans les cochons
infectés avec le serovars de Salmonella, y compris le Choleraesuis.
Les méthodes statistiques de contrôle du processus peuvent être
utilisées avec les résultats de la mix-ELISA pour déterminer
les valeurs limites pour
évaluer le statut sérologique de Salmonella. Le degré d'exposition
de Salmonella dans les cochons peut être estimé en utilisant
les méthodes de SPC.
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Keywords: swine, statistical
process control, Salmonella, ELISA
Search the AASV web site
for pages with similar keywords.
Received: September
12, 2002
Accepted: March
2, 2004
Different sources of variation
are inherent to serologic assays. Two sources of variation are the individual
animal and the group of animals being tested. The immunologic status of any
individual animal or group of animals is dynamic.1 That is, the detected concentration of antibody
in serum samples is likely to vary from one day to the next
when the same animal is sampled and tested using the same
antibody assay. There is also variation in the
same sample within the same laboratory over time. That is, there is a
degree of variation inherent in the assay system.
Determination of cutoff values for serologic
assays should account for these sources of variation. A method that accounts for this expected variation (dispersion) of antibody
concentration for known-positive and known-negative animals would allow for
analytical rather than empirical assessment of
diagnostic test results.2 Thus, it might be
possible to determine with defined limits of certainty whether an individual animal or
a group of animals is seropositive or seronegative for a given condition or
pathogen, on the basis of the test result and the
variation within the sampled population. Such an assessment of test results would be
useful for pathogen reduction programs that address swine herd health or preharvest
food safety, in the same manner as has been used for the continuous improvement of
processes used in manufacturing.3-7
Optimal use of serologic testing requires a working knowledge of disease
pathogenesis, immunodiagnostic techniques, and
statistical inference.2 Classical validation of
diagnostic tests requires testing many samples from known-infected (true-positive)
and known-uninfected (true-negative)
animals.8 Diagnostic sensitivity and specificity
are then determined by use of a 2 x 2
table.9 The foundation for calculation of
sensitivity and specificity is determination of a cutoff value for the
assay.10 Cutoff values (critical values) are used to
determine whether a sample is positive or negative
for the condition being tested for.8 The
cutoff value can be determined by several methods, for
instance, empirically from histograms of true-positive and true-negative
animals.11,12 Receiver operating characteristic
(ROC) curve analysis uses the values from true-positive and true-negative samples to
optimize diagnostic sensitivity and
specificity.11 However, ROC analysis does not
account for within-group variation. Assays can be compared by the respective
areas under their ROC curves.11 Greiner et
al11 described other methods for determining cutoff
values, none of which account for the variation that may exist in the tested
populations. In addition, these methods tend to determine cutoff values for individuals,
not groups (ie, herd assays). The Gaussian (normal) distribution has been used to
determine cutoff values, but is not an adequate method for skewed or
multimodal data distributions.11
Statistical process control (SPC) methods were developed by
Shewhart3,4 to account for the variation that exists within
k subgroups of n observations. Over time,
SPC permits each subgroup's variation differences to be
assessed.3,6 The four foundations of SPC charts are as
follows.13 First, control limits are always set at a distance
of three sigma units on either side of the central
line.13 Second, sigma has been defined as the standard deviation (SD) of a
homogeneous set of data and is estimated using an average dispersion statistic (the
average range) or a median dispersion statistic
(the median range).13 Sigma is used in the
context of the empirical rule6 applied to a
homogeneous set of data: approximately 60% to 75% of the data will be located within
a distance of one sigma unit on either side of the average; usually 90% to 98% of
the data will be located with a distance of two sigma units on either side of the
average; and approximately 99% to 100% of the data will be located within a distance
of three sigma units on either side of the average. Thus, SPC methods have the
advantage of being insensitive to distribution of
the data of each of the subgroups because of the robust nature of using three-sigma
limits about the mean.6,7,13 In addition,
construction of the limits is less dependent on the measured process being in
statistical control.13 Third, the conceptual
foundation of control charts is rational sampling
and rational subgrouping.13 Two conditions
are required for any subgrouping to be rational: each subgroup must be logically
homogeneous, and the variation within subgroups must be the logical and proper
yardstick for setting limits on the variation
between subgroups.14 Fourth, control charts
are effective only to the extent that the organization can use, in an effective manner,
the knowledge gained from the charts.13
The essence of SPC comprises simplicity and insight: the calculations require only
a calculator, a table of correction factors for
analysis,5-7,13 and graph paper for
presentation.7 When data are collected in
rational subgroups, three-sigma limits can be
calculated and plotted for the subgroup averages, the subgroup dispersion
statistic (range), and the individual data within
all subgroups.6,7,13 An estimate of the
dispersion parameter (sigma) can be made from any of at least seven statistics:
average range, median range, average root mean square (RMS), median RMS, average
SD, median SD, and pooled variance.13
After the dispersion statistic is calculated, it
is multiplied by its appropriate correction factor to estimate three-sigma. For
the same data set, any method for dispersion estimation will be sufficient. The
average range requires the least rigor: subtract
the lowest subgroup value from the highest subgroup value. The purpose of analysis
is insight rather than numbers,13 as the
objective is not "to compute the right
limits" but rather "to take the right action
upon the process"13; that is, to properly
interpret the data from the process. Thus, the
average range is used as an estimator of sigma.
The charts thus created are known as the average chart (for differences between
the subgroups), the range chart (for checking consistency within the subgroups), and
the individual-value histogram (which measures differences among the individual
data values).13 When all data (group
averages or ranges) fall within three-sigma limits,
the process from which the data were obtained is said to be
predictable.6,7,13 A process is defined as unpredictable when data
obtained from the process occur in one of four patterns, known as
signals.6
A signal is a single data point that falls outside the upper or lower three-sigma
limits, or a series of data points that occur with
a nonrandom pattern of variation around the central line. Signals were defined using
the following rules6: Rule 1, one data
point falls outside the upper or lower three-sigma
limits; Rule 2, two of three consecutive data points fall on the same side of the
average and beyond the two-sigma limits; Rule 3, four of five consecutive data points fall
on the same side of the average and beyond the one-sigma limits; Rule 4, eight
consecutive data points fall on the same side of the average. A process has undergone a
detectable change if at least one of these situations
exists.13
These criteria can also be used to determine if one process is different from
another by comparing the data points of one process to the limits of the other. If
the data points from an average or range value for one process show a signal when
compared to the limits calculated for the other process, the two processes are said to
be detectably different from each other.
In 1993, food-borne infections due to pork contaminated with
Salmonella serovar Infantis prompted the Danish
government to institute a Salmonella Combat
Program.15 Features of this program included
serologic testing of breeding and market
swine.15 An indirect enzyme-linked
immunosorbent assay (ELISA) was developed using lipopolysaccharide from
Salmonella serovars Typhimurium and Choleraesuis
(mix-ELISA).16 The mix-ELISA has been
used to test serum and meat juice.17
Commercial swine herds are assigned to one of four
Salmonella levels (categories) based on seroprevalence, ie, the proportion
of samples per sampling with OD% >
20.18 The originally published cutoff value
was OD% > 10.16
The purposes of this study were to confirm previously published
results16 of studies on the mix-ELISA, to evaluate SPC
methods for diagnostic test validation, and thus
to demonstrate how serologic results could be used to evaluate
Salmonella status of groups of pigs prior to
slaughter.
Materials and methods
Animals
Forty 17-day-old pigs were purchased from one sow farm which had no history
of clinical salmonellosis nor use of any Salmonella
vaccine. Each pig was individually identified by a numbered ear tag and
randomly assigned to one of four treatment groups (n = 10): one negative
control group and three inoculated groups, each inoculated with one of three
Salmonella serovars, Typhimurium, Choleraesuis,
or Infantis. Each treatment group was randomly assigned to one of four
individual isolation rooms, each containing one
5.5-m2 pen with solid flooring. Water was
provided ad libitum and feed was provided daily. This study was conducted in the Iowa State University Livestock Infectious
Disease Isolation Facility. Experimental protocols were approved by the Iowa State
University Committee on Animal Care.
Pre-inoculation sample collection
Blood samples and rectal swabs were collected from all pigs upon receipt,
weekly for 9 weeks prior to inoculation, and on
the day of inoculation (Day 0). On each sampling occasion, pooled fecal samples
(five approximately 5-g samples) were collected from each pen floor. Rectal swabs and
pooled floor feces were cultured for
Salmonella. In order to confirm negative
Salmonella status, a total of 24 pigs were randomly
selected for euthanasia and necropsy prior to infection, one pig from each
treatment group on Days -53, -46, -25, and -18,
and two pigs from each treatment group on Day -4. We were unable to draw
blood from a total of five different pigs: one pig on Day -63, three pigs on Day -60,
and one pig on Day -53. Each pig was exsanguinated after
euthanasia, and blood was collected for serological testing for
Salmonella antibody.
Inoculation with Salmonella serovars
The strains of Salmonella Typhimurium,
Infantis, and Choleraesuis var
Kunzendorf that were used to inoculate the pigs
were obtained during field studies from groups of market-weight pigs with no history
of clinical salmonellosis.19 There was no
history of Salmonella vaccine use on any of the farms from which the strains were
obtained. The remaining 16 pigs (four per treatment group) were approximately 77 days
old when inoculated (Day 0). Feed was withheld from the inoculated pigs on Day 0.
Each pig was manually restrained and 1.0 mL of inoculum (approximately
108 organisms) was sprayed into one nostril with a
disposable syringe and Teflon cannula. The group
inoculated with Salmonella Infantis was re-inoculated on Day 40 to attempt to
produce reference sera for later studies.
Sampling post inoculation and termination of the experiment
Blood and rectal swabs were collected from all 16 pigs immediately prior to
inoculation on Day 0. Pooled pen fecal samples
were also collected on Day 0. After inoculation, blood and pooled pen fecal samples
were collected on Days 3, 10, 17, 24, 31, 38, and 45; rectal swabs were collected on
Days 0 through 5, 10, 17, 24, 31, 38, and 45. The group inoculated with Salmonella Typhimurium were euthanized on Day
24 (in order to have reference sera from a time when
Salmonella antibody was elevated) and the other three groups on Day 45.
Pigs were exsanguinated at euthanasia and necropsies were performed. Samples of
tonsil, lung, liver, spleen, jejunum, ileum,
ileocecal lymph node, cecum, and colon were submitted for culture of
Salmonella.
Blood and fecal sample testing
All serum samples were tested for
Salmonella antibody in duplicate, over the course of
2 days, using the mix-ELISA.16 Results
were reported as OD%, from which cutoff values were to be determined. Samples were cultured for Salmonella as previously
described.20 Presumptive
Salmonella colonies were tested for "O"
antigens by agglutination with serogroup antisera, and isolates were submitted for
serotyping to the National Veterinary Services
Laboratory (US Department of Agriculture, Ames, Iowa).
Preparation of SPC charts
Average and range charts were created for each treatment group according
to Wheeler.6,7,13 The OD% values for
each treatment group were subgrouped (n = 4) by date of blood sampling, and these
data were used to assess the serologic status of treatment groups. Results from the
negative control group were used to determine the cutoff for group average OD%,
group OD% range, and individual OD% value. True
Salmonella status of individuals was defined by culture results. A pig was
considered true-positive if Salmonella was
detectable either by rectal swab or organ culture. A pig was considered true-negative if
Salmonella was not detectable either in a
rectal swab or organ culture. The upper control limits (UCL) and lower control limits (LCL) for the grouped
data and the upper natural process limits (UNPL) and lower natural process
limits (LNPL) for the individual data were calculated using three-sigma limits for
group averages and ranges as well as individual
values.13 The constants A2,
D3, D4, and E2 are calculated from bias correction
factors (Figure 1).6,7,13 For a subgroup of
four, there is no D3 and the lower range
limit (LRL) is 0.13
Figure 1: Calculation of control limits for average and range
(X-bar - R) charts used to determine the cutoff values of the mix-ELISA
in this study. The upper control limit (UCL) for the X-bar chart is calculated
as UCL X-bar = X-bar + (A2 x R-bar) and the lower control limit
(LCL) as LCL X-bar = X-bar - (A2 x R-bar), where X-bar = the
grand average of the subgroup averages. The UCL and LCL for the R charts
are calculated as UCLR = D4 x R-bar and LCLR =
D3 x R-bar, respectively. The upper natural process limit (UNPL)
for individual values is calculated as UNPLX = X-bar + (E2 x
R-bar) and the lower natural process limit (LNPL) as LNPLX =
X-bar - (E2 x R-bar), where X-bar = the average of the individual
values. Factors for these formulas, given k subgroups each with n observations,
are provided. For n greater than 15, refer to Wheeler, 1995.13 Reprinted
with permission from SPC Press. Copyright 2004, SPC Press, Knoxville, Tennessee.
All rights reserved.

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For the average OD% of each treatment group,

For individual values within the negative control group,

After these experiments, infected and noninfected processes were defined. The
infected process was defined as pigs infected with
Salmonella (inoculated and confirmed infected by culture). The noninfected
process was defined as pigs not infected with
Salmonella (not inoculated and confirmed not infected by culture). The UCL, upper range limit (URL), and UNPL for the
negative controls were used as the basis for
cutoff determination. A conservative approach was used to calculate
the cutoff by approximating the one-sided 95% confidence interval of the
respective upper limits. Thus, the group average OD% cutoff was calculated as follows:

where Zone-sided0.95 = 1.645; sd = the
standard deviation of the 24 OD% values for the negative control pigs from Days 3,
10, 17, 31, 38, and 45; and N = 24, the number of all OD% values in the negative
control group. The group range cutoff was calculated as follows from the range values of the
negative control group:

The cutoff for individual values was calculated as follows:

Serologic sensitivity and specificity were calculated by considering the
one-sided 95% confidence interval for the UNPL of individual serologic values and the
known culture status of the negative control group. As OD% values were reported
as whole numbers,16 a calculated UNPL
plus the one-sided 95% confidence interval that was not a whole number was
rounded down for use as the cutoff. A treatment group was determined to be seropositive
if one pig's OD% was greater than this cutoff. Seroprevalence for each treatment
group was calculated as a proportion of the number
of seropositive pigs in the group, using the UNPL for individual values as
the cutoff. ROC analysis was performed on the individual OD% results for each
postinoculation day and on all individual results in the
experiment, using SPSS Base Version 7.5 (SPSS Inc, Chicago, Illinois).
Results
Bacteriology
All individual pig rectal swabs and pooled fecal samples from the pen floors that
were collected prior to inoculation, and all organ samples collected from pigs
euthanized prior to Day 0, were culture-negative
for Salmonella. All pooled fecal samples (pen feces) from the
Salmonella Choleraesuis group and from the negative control pigs, from Day
0 through the end of the study, were culture-negative for
Salmonella. In the Salmonella Typhimurium group,
Salmonella Typhimurium was detected in pen
feces only on Day 23, and in the Salmonella
Infantis group, Salmonella Infantis was
detected in pen feces on Days 17, 23, and 38.
Salmonella was isolated from at least
one rectal swab in all three groups of inoculated pigs, and in each case, the isolates were
the homologous serotypes. All pigs inoculated with either
Salmonella Typhimurium or Salmonella
Infantis shed the homologous serotype. In the
Salmonella Typhimurium group, the rectal swab from one pig
was culture-positive for Salmonella Typhimurium on Day 23. In the
Salmonella Choleraesuis group, rectal swabs
from one pig on Day 1 and another pig on Days 3 and 4
were culture-positive for Salmonella Choleraesuis. In the
Salmonella Infantis group (re-inoculated on Day
40), rectal swabs from all four pigs were culture-positive for 4 days after infection, then
at least once after re-inoculation.
All organ samples collected from the negative control pigs were culture-negative
for Salmonella. In the Salmonella
Typhimurium and Salmonella Infantis groups, at least
one organ of all four pigs was culture-positive for the homologous serotype. In the
Salmonella Choleraesuis group, at least one
organ was culture-positive in only two of the four pigs.
Serological results
Figure 2 summarizes the time course of
Salmonella antibody production detected by the mix-ELISA (expressed as
average OD%) in all pigs sampled prior to inoculation. In some pigs, OD% was detectable
at Day -63. Average OD% declined during the course of the pre-infection
period (Days -63 to 0).
Figure 2: Blood samples were collected weekly from forty 17-day-old
pigs (culture-negative for Salmonella) upon receipt, for 9 weeks
prior to inoculation with Salmonella serovars, and on the day of
inoculation at approximately 77 days of age (Day 0). Pigs were divided
into four equal treatment groups housed in separate rooms. A total of 24
pigs were euthanized prior to inoculation: one pig from each treatment
group on Days -53, -46, -25, and -18, and two pigs from each treatment
group on Day -4. We were unable to draw blood from a total of five different
pigs: one pig on Day -63, three pigs on Day -60, and one pig on Day -53.
Serum samples were tested for Salmonella antibody using the mix-ELISA
and results were reported as OD%. Average OD% is the average for all animals
tested on the day of sampling (n).

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Figures 3 through 6 summarize the postinoculation time course of antibody
production for all four treatment groups (n = 4) plotted on
average and range charts. The OD% increased as early as 3 days post
inoculation in at least one pig in each group inoculated with
Salmonella.
Figure 3: Forty 17-day-old pigs (culture-negative for Salmonella)
were evenly assigned to four treatment groups housed in separate rooms
and inoculated with Salmonella serovars Typhimurium, Infantis, or
Choleraesuis var Kunzendorf, or not inoculated (negative control group),
at approximately 77 days of age (Day 0). Blood samples were collected upon
receipt, weekly for 9 weeks prior to inoculation with Salmonella (Day
0), and weekly until termination of the experiment, which was Day 45 for
all groups except the serovar Typhimurium group, which was euthanized on
Day 24. Serum samples were tested for Salmonella antibody using
the mix-ELISA. Results were reported as OD% and subgrouped by date of collection.
Statistical process control charts of mix-ELISA results from the negative
controls are shown: Figure 3A, X-bar chart of OD% values and Figure 3B,
range chart of OD% values. X-bar is the subgroup average; X-bar-bar is
the grand average of the subgroups; UCL and LCL are the upper and lower
control limits, respectively, of the X-bar chart; n is the number of animals
per subgroup; R is the range of data for each subgroup; R-bar is the average
range for all subgroups; and URL is the upper range limit for the R chart.
 
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Figure 4: Statistical process control charts of the mix-ELISA
results from the Salmonella Typhimurium-infected group of pigs in
the study described in Figure 3: Figure 4A, X-bar chart of OD% values and
Figure 4B, range chart of OD% values. X-bar is the subgroup average; X-bar-bar
is the grand average of the subgroups; UCL and LCL are the upper and lower
control limits, respectively, of the X-bar chart; n is the number of animals
per subgroup; R is the range of data for each subgroup (subgrouped by date
of blood collection); R-bar is the average range for all subgroups; and
URL is the upper range limit for the R chart.
 
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Figure 5: Statistical process control charts of the mix-ELISA
results from the Salmonella Choleraesuis-infected group of pigs
in the study described in Figure 3: Figure 5A, X-bar chart of OD% values
and Figure 5B, range chart of OD% values. X-bar is the subgroup average;
X-bar-bar is the grand average of the subgroups; UCL and LCL are the upper
and lower control limits, respectively, of the X-bar chart; n is the number
of animals per subgroup; R is the range of data for each subgroup (subgrouped
by date of blood collection); R-bar is the average range for all subgroups;
and URL is the upper range limit for the R chart.
 
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Figure 6: Statistical process control charts of the mix-ELISA
results from the Salmonella Infantis-infected group of pigs in the
study described in Figure 3: Figure 6A, X-bar chart of OD% values and Figure
6B, range chart of OD% values. X-bar is the subgroup average; X-bar-bar
is the grand average of the subgroups; UCL and LCL are the upper and lower
control limits, respectively, of the X-bar chart; n is the number of animals
per subgroup; R is the range of data for each subgroup (subgrouped by date
of blood collection); R-bar is the average range for all subgroups; and
URL is the upper range limit for the R chart.
 
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The OD% values from the negative controls were used to determine three serologic
cutoffs: group average OD% = 7.239, group range OD% = 12.612, and
individual OD% = 11.024. As OD% results are reported as whole numbers, the
individual OD% cutoff was 12. When the definition of true Salmonella status was applied, one pig inoculated
with Salmonella Infantis that was never
culture-positive was excluded from the calculation of sensitivity and specificity for
individual values. Mix-ELISA sensitivity was 0.40 (95% CI, 0.046 - 0.754) on Day 3;
1.00 (95% CI, 0.75 - 1.00) on Day 10; 0.86 (95% CI, 0.455 - 1.00) on Day 38;
and 1.00 (95% CI, 0.75 - 1.00) on Day 45. Mix-ELISA specificity was 1.00 (95%
CI, 0.75 - 1.00) for the same 4 days. When individual results from all
postinoculation days were combined, sensitivity was
0.85 (95% CI, 0.36 - 1.00) and specificity was 1.00 (95% CI, 0.96 - 1.00).
When seroprevalence was the criterion to assess group
Salmonella status, all inoculated groups were correctly identified as
positive (seroprevalence > 0) and all
noninoculated groups were correctly identified as
negative (seroprevalence = 0).
The average OD% and OD% range of the three inoculated groups for each
postinoculation day, with the exception of the
average OD% of the Salmonella Infantis group
at Day 3, were greater than the UCL (7.239) on the SPC chart of the negative
control pigs from Day 3 until the end of the
study. These are Rule 1 signals, interpreted as
meaning that the OD% averages from these days were not characteristic of
Salmonella-negative pigs, and the pigs were
therefore considered exposed to Salmonella.
The OD% of the Salmonella Infantis group on Day 3 (4.3) was less than 7.239, but
the OD% range of this group (13) was greater than that of the negative control pigs
for that day (12.617). Thus, this group was correctly identified as exposed to
Salmonella. The negative controls were correctly
identified as Salmonella-negative on all
postinoculation days.
When the SPC charts for the Salmonella
Infantis and Salmonella
Choleraesuis groups were compared to those of the
Salmonella Typhimurium group, the
Salmonella Choleraesuis-infected group showed a
Rule 1 signal on Day 38, Rule 2 signals on Days 17, 31, 38, and 45, and Rule 3 signals
on Days 3, 10, 17, 31, 38, and 45. The Salmonella
Infantis group showed Rule 1 signals on Days 17, 31, 38, and 45, and Rule
2 and 3 signals on Days 3, 10, 17, 31, 38, and 45. Thus, the serologic responses
of the Salmonella Infantis and
Salmonella Choleraesuis groups differed from that
of the Salmonella Typhimurium group.
The areas under the ROC curve for individual OD% values on each
postinoculation day were 0.286 for Day 3, 0.00 for
Day 10, 0.00 for Day 38, and 0.00 for Day 45. The area under the ROC curve for all
individual OD% values was 0.936 (95% CI, 0.878 - 0.994), with sensitivity
optimised at 0.849 and specificity optimised at
1.00 when the cutoff was OD% >= 11.5. When the cutoff was OD%
>= 12.5, sensitivity was 0.830 and specificity remained at 1.00.
Discussion
This study confirmed that the mix-ELISA detects antibody from pigs infected
with Salmonella16,21in a laboratory setting.
The SPC methods used in this study were able to detect infected
groups 3 days after infection. Nielsen et al
(1995)16 detected seroconversion in feeder pigs 7
days post inoculation and Harris21
detected seroconversion 8 days post inoculation.
Thus, we would expect the mix-ELISA to detect populations of swine
exposed to Salmonella serovars within the last
3 to 8 days of finishing. The evidence of this exposure in a swine population will be
one of the following criteria: average OD% greater than the upper 95%
confidence interval of the UCL of average OD% from
a known-negative population; range of OD% greater than the upper 95%
confidence interval of the UCL average range
values for a known-negative population; or prevalence > 0,
determined by the UNPL for individuals from a
known-negative population. Additional testing of
known-negative populations is recommended to determine the cutoff and assay
characteristics determined herein.12 Statistical process control methods are rational and objective for determining
the cutoffs for diagnostic assays. Data from known-negative populations serve as
the foundation for constructing the cutoff. When these data are collected in
rational subgroups, k, containing n observations
per subgroup, control limits are calculated from
approximately 0.9k (n - 1) degrees
of freedom.13 When the degrees of
freedom are >10, the calculated control limits
are "set" and are not appreciably changed
by additional degrees of freedom.13 The
limits for this study were calculated from 16.2 degrees of freedom. An upper 95%
confidence interval can be calculated to add a conservative factor for a cutoff, thus
reducing the likelihood of making Type I errors (false-positive) in data interpretation.
Because rational subgrouping is used to calculate SPC limits (and is
foundational for calculating SPC limits), one may
then make objective conclusions about the populations from which the samples
were collected. An investigator evaluates the location statistic (eg, average OD%) and
the dispersion statistic (eg, OD% range) to determine the status of each sampled
population compared to its respective limits. Since the cutoff is determined by
testing known-negative swine, thus characterizing true-negative populations and
true-negative individuals, interpretation of the
results can be made without regard for the time when pigs were exposed to
Salmonella. Group average or range values or
individual values that lie outside these limits are
not characteristic of negative groups or individuals, and thus the interpretation is
that these pigs are exposed. Therefore, SPC methods provide both a herd-level and
individual-level method for evaluating diagnostic assay results.
Statistical process control methods clearly provide three different cutoffs for
evaluating data: subgroup average OD%, subgroup OD% range, and individual OD%.
While other methods are recognized for determining
cutoff,9,11 SPC methods have the
advantage of being simple and insensitive to data
distribution. For instance, ROC curve analysis can be used to determine an optimized
cutoff. In this study, ROC curve analysis provided the same cutoff as did SPC methods
when all individual data were analysed. ROC analysis required a statistical software
program, did not take into account the group average or dispersion (range) statistic as
parameters to assess group status, and did not analyse each subgroup. The SPC values
can be determined with pencil, paper, and a table of average and range chart
factors. The robust nature of SPC methods stems
from the use of three-sigma limits, making the distribution of subgroup data irrelevant
to the accuracy and utility of calculated
limits.13 Thus, data transformation to
normalize data is also not necessary.13
When SPC methods are used, a Salmonella control-and-reduction program can be
introduced without concern for capricious minimum levels of exposure. Rather
than arbitrarily deciding to set a minimum level of exposure to
Salmonella, production systems can compare their serologic data to
known-negative populations of market pigs. Then they can continue to monitor
Salmonella serostatus and measure the effectiveness
of interventions by first describing the current level of exposure to
Salmonella. Thus, a system has created the three components
of an operational definition22 to evaluate
its Salmonella control and reduction. An operational
definition22 has three components: a stated objective (reduction and control
of Salmonella); a method of measuring progress toward that objective
(ongoing serological testing using the mix-ELISA); and a method to assess whether the
objective has been or is being met (SPC charts and the use of the interpretation
rules).22
We clearly showed that the immune response produced after exposure to
Salmonella Typhimurium was different from that
elicited by exposure to Salmonella
Choleraesuis and Salmonella Infantis. The implication
of this in a Salmonella reduction program
is that a reduction in OD% might be indicative of a change in the serotype present
in the herd rather than an effect associated with an intervention strategy. One
would expect that if a new serotype were
introduced, herd SPC charts would remain constant
in the absence of additional intervention strategies. In the presence of an
intervention strategy, the farm management team
would need to determine if a change in serotype had occurred, then re-evaluate and
redesign a strategy for further decreasing
Salmonella exposure and measure that reduction via
a reduction in OD%. In this study, the mix-ELISA results of the pre-inoculation
serum samples indicate that there were some seropositive pigs received for this
experiment. Since there was no bacteriological
evidence of Salmonella from any rectal swab
or pooled pen samples, we conclude that these pigs either suckled seropositive sows or
had been infected with Salmonella and
ceased shedding prior to receipt.
An objection to use of serological testing to assess
Salmonella status is that a pig can become infected and shed in as little as
4 hours post infection,23 implying that
low-level exposure swine could be infected in lairage when brought into contact
with high-level exposure swine. Serologic monitoring of populations of swine over
time using SPC methods would enable production systems and abattoirs to identify
either low-level or high-level exposure sources of pigs and to make decisions that might
prevent cross-contamination.
Statistical process control methods might also be used to assess the
manufacturing process of any serologic assay kit or
components, thus permitting predictable results between and within laboratories. When
a diagnostic-kit manufacturing company can display statistical control (absence
of signals) in its processes for assay manufacturing, one would expect that
end-users would be able to predictably perform the
assay. In the absence of predictable results from a
laboratory, SPC methods provide an objective basis for investigating
possible causes of the lack of predictability.
Once the causes have been removed, and the assay results become predictable, results
can be confidently reported by the laboratory. In this scenario, it would be
expected that the following sources of variation could
be controlled: serial-to-serial; laboratory-to-laboratory; technician-to-technician;
and day-to-day. Studies are in progress to test this system of consistent (predictable)
assay manufacturing processes and consistent (predictable) results across the
above sources of potential variation.
Implications
- () Statistical process control methods can be used to evaluate the
characteristics of the Salmonella mix-ELISA.
- () Statistical process control methods and the mix-ELISA can be used
as tools for a Salmonella monitoring strategy.
Acknowledgements
The authors thank Ellen Martens who completed all of the serologic testing
for this study, Kelly Burkhart who completed all of the bacteriologic culture work for
this study, and David Brown for the care of the animals during the course of this
study. This study was supported in part by the United States Department of
Agriculture Fund for Rural America and the Iowa
Agriculture Experimental Station.
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